Matrix genetics, part 1: permutations of positions in triplets and symmetries of genetic matrices

نویسنده

  • Sergey V. Petoukhov
چکیده

The Kronecker family of the genetic matrices is investigated, which is based on the genetic matrix [C T; A G], where C, T, A, G are the letters of the genetic alphabet. The matrix [C T; A G] in the second Kronecker power is the (4*4)-matrix of 16 duplets. The matrix [C T; A G] in the third Kronecker power is the (8*8)-matrix of 64 triplets. It is significant that peculiarities of the degeneracy of the genetic code are reflected in the symmetrical black-andwhite mosaic of these genetic matrices. The article represents interesting mathematical properties of these mosaic matrices, which are connected with positional permutations inside duplets and triplets; with projector operators; with unitary matrices and cyclic groups, etc. Fractal genetic nets are proposed as a new effective tool to study long nucleotide sequences. Some results about revealing new symmetry principles of long nucleotide sequences are described.

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

ثبت نام

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Matrix genetics, part 5: genetic projection operators and direct sums

The article is devoted to phenomena of symmetries and algebras in matrix presentations of the genetic code. The Kronecker family of the genetic matrices is investigated, which is based on the alphabetical matrix [C A; U G], where C, A, U, G are the letters of the genetic alphabet. The matrix P=[C A; U G] in the third Kronecker power is the (8*8)-matrix, which contains 64 triplets. Peculiarities...

متن کامل

Matrix genetics, part 4: cyclic changes of the genetic 8-dimensional Yin-Yang-algebras and the algebraic models of physiological cycles

The article continues an analysis of the genetic 8-dimensional Yin-Yang-algebra. This algebra was revealed in a course of matrix researches of structures of the genetic code and it was described in the author's articles arXiv:0803.3330 and arXiv:0805.4692. The article presents data about many kinds of cyclic permutations of elements of the genetic code in the genetic (8x8)matrix [C A; U G] of 6...

متن کامل

Dyadic groups, dyadic trees and symmetries in long nucleotide sequences

The conception of multi-alphabetical genetics is considered. Matrix forms of the representation of the multi-level system of molecular-genetic alphabets have discovered algebraic properties of this system. These properties are connected with well-known notions of dyadic groups and dyadic-shift matrices. Matrix genetics shows relations of the genetic alphabets with some types of hypercomplex num...

متن کامل

F-Permutations induce Some Graphs and Matrices

In this paper, by using the notion of fuzzy subsets, the concept of F-permutation is introduced. Then by applying this notion the concepts of presentation of an F-polygroup, graph of an F-permutation and F-permutation matrices are investigated.

متن کامل

The Algebra of MIMO Channels

We consider ergodic coherent MIMO channels. We characterize the optimal input distribution for various fading matrix distributions. First, we describe how symmetries in the fading matrix distribution are preserved as symmetries in the optimal input covariance and thus yield to specification of the optimal input. We will see that group structures and notion of commutant appear as key elements. S...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

عنوان ژورنال:
  • CoRR

دوره abs/0803.0888  شماره 

صفحات  -

تاریخ انتشار 2008